jcel
experiments
The following ontologies were tested using jcel 0.12.0 and the CEL Plug-in 0.5.0 to compare execution times. Specifications:

ontology input output number of entries jcel memory jcel time CEL time
Gene Ontology owl xml 154489 89 MB 2.8 s 3.2 s
NCI Thesaurus owl xml 346887 588 MB 6.2 s 10.2 s
CEL GALEN owl xml 6836237 301 MB 51 s 134 s
Not GALEN owl xml 224565 50 MB 2.7 s 5.2 s
Foundational Model of Anatomy 9576858 480 MB 149 s 2388 s
SNOMED CT

143039451 2378 MB 1109 s 705 s




The following ontologies were tested using jcel 0.8.0 and the CEL Plug-in 0.4.0 to compare execution times. Specifications:

ontology input output number of entries jcel memory jcel time CEL time
Gene Ontology krss owl xml 142254 91 MB 3 s 9 s
CEL GALEN krss owl xml 23807869 422 MB 63 s 148 s
Not GALEN krss owl xml 445989 73 MB 3 s 6 s
Foundational Model of Anatomy 1290687 1329 MB 116 s 2315 s
SNOMED CT

522296612 2490 MB 2945 s 810 s





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